<?xml version="1.0" encoding="utf-8" ?>

<XML>
  <JOURNAL>   
    <YEAR>2015</YEAR>
    <VOL>7</VOL>
    <NO>1</NO>
    <MOSALSAL>24</MOSALSAL>
    <PAGE_NO>49</PAGE_NO>  
    <ARTICLES>

<ARTICLE>
    <TitleE>Autistic Disorders and Medical Biotechnology</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Autistic Disorders (ADs) are neuro-developmental disorders in the category of pervasive developmental disorders chiefly described by three main deficits: 1) deviant communication, 2) impaired reciprocal social interaction, and 3) limited, repetitive and stereotypic patterns of behaviors or interests &lt;sup&gt;1&lt;/sup&gt;. The world-wide prevalence of ADs is estimated to be 62/10,000 &lt;sup&gt;1&lt;/sup&gt;. Although various treatment regimens have been proposed for improving overall function of autistic patients, a definite efficient treatment which can target both core and associated symptoms in ADs has not been established so far. For example, current approved drugs by the Food and Drug Administration (FDA) such as risperidone and aripiprazole have not been proven to pose significant effect on the core features of this disorder &lt;sup&gt;2-4&lt;/sup&gt;.&lt;/p&gt;

&lt;p&gt;While the absolute pathophysiologic mechanism of ADs is still debated, several genetic, environmental and neurobiological factors such as immune dysfunction, oxidative stress and imbalance of the inhibitory-excitatory systems are implicated in the pathogenesis of these disorders &lt;sup&gt;5-7&lt;/sup&gt;. Neurobiological models have become research areas of interest for development of novel therapeutic agents in this regard &lt;sup&gt;1&lt;/sup&gt;. Increased neuronal excitation in various central pathways has been proposed as one of the main neurobiological dysregulations in autistic patients &lt;sup&gt;1&lt;/sup&gt;. Indeed, biotechnology and in particular gene therapies plays an important role in the future of research in autism &lt;sup&gt;1&lt;/sup&gt;.&lt;/p&gt;

&lt;p&gt;&lt;em&gt;&lt;strong&gt;Neurexin 1:&lt;/strong&gt;&lt;/em&gt; Part of family of genes that play a role with the neurotransmitter glutamate which is linked to autism. Gene chip technology was used to scan for genetic similarities in people with autism. DNA was scanned to search for copy number variations (CNVs), or insertions and deletions of genetic material linked to autism &lt;sup&gt;1&lt;/sup&gt;.&lt;/p&gt;

&lt;p&gt;&lt;em&gt;&lt;strong&gt;Adult Form of Fragile X Syndrome:&lt;/strong&gt;&lt;/em&gt; Expression of toxic RNA leads to Fragile X Tremor Ataxia Syndrome is modifiable by gene therapy &lt;sup&gt;1&lt;/sup&gt;.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;Fragile X Syndrome:&lt;/strong&gt; Caused by loss of a gene called &lt;strong&gt;FMPR&lt;/strong&gt; which acts as a break on a protein synthesis in specific area of the brain. This allows another protein, mGluR5 &lt;strong&gt;Metabotropic Glutamate Receptor&lt;/strong&gt;, to function unchecked resulting in over activity in the brain. Reducing &lt;strong&gt;mGluR5&lt;/strong&gt; reduces symptoms associated with fragile x syndrome &lt;sup&gt;1&lt;/sup&gt;.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;MECP2&lt;/strong&gt; Activation of the gene reversed Rett syndrome. The MECP2 gene mutation is present in 95 percent of individuals with the disease &lt;sup&gt;1&lt;/sup&gt;.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>1</FPAGE>
            <TPAGE>1</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Shahin</Name>
<MidName></MidName>
<Family>Akhondzadeh</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Autistic disorder</KeyText></KEYWORD><KEYWORD><KeyText>Biotechnology</KeyText></KEYWORD><KEYWORD><KeyText>Genetic diseases</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>193.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Mohammadi MR, Akhondzadeh S. Autism spectrum disorders: etiology and pharmacotherapy. Current Drug Therapy 2007;2:97-103.##Akhondzadeh S, Fallah J, Mohammadi MR, Imani R, Mohammadi M, Salehi B, et al. Double-blind placebo-controlled trial of pentoxifylline added to risperidone: effects on aberrant behavior in children with autism. Prog Neuropsychopharmacol Biol Psychiatry 2010;34:32-36.##Ghaleiha A, Asadabadi M, Mohammadi MR, Shahei M, Tabrizi M, Hajiaghaee R, et al. Memantine as adjunctive treatment to risperidone in children with autistic disorder: A randomized, double-blind, placebo-controlled trial. Int J Neuropsychopharmacol 2013;16(4):783-789.##Ghaleiha A, Ghyasvand M, Mohammadi MR, Farokhnia M, Yadegari N, Tabrizi M, et al. Galantamine efficacy and tolerability as an augmentative therapy in autistic children: A randomized, double-blind, placebo-controlled trial. J Psychopharmacol 2013;28(7):677-685.##Ghaleiha A, Mohammadi E, Mohammadi MR, Farokhnia M, Modabbernia A, Yekehtaz H, et al. Riluzole as an adjunctive therapy to risperidone for the treatment of irritability in children with autistic disorder: A double-blind, placebo-controlled, randomized trial. Ped Drugs 2013;15:505-514.##Mohammadi MR, Yadegari N, Hassanzadeh E, Farokhnia M, Yekehtaz H, Mirshafiee O, et al. Double-blind, placebo-controlled trial of risperidone plus amantadine in children with autism: a 10-week randomized study. Clin Neuropharmacol 2013;36:179-184.##Asadabadi M, Mohammadi MR, Ghanizadeh A, Modabbernia A, Ashrafi M, Hassanzadeh E, et al. Celecoxib as adjunctive treatment to risperidone in children with autistic disorder: a randomized, double-blind, placebo-controlled trial. Psychopharmacology (Berl) 2013;225:51-59. ##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Production and Characterization of Monoclonal Antibodies against Human Prostate Specific Antigen</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: Prostate Specific Antigen (PSA) is an important laboratory marker for diagnosis of prostatic cancer. Thus, development of diagnostic tools specific for PSA plays an important role in screening, monitoring and early diagnosis of prostate cancer. In this paper, the production and characterization of a panel of murine monoclonal antibodies (mAbs) against PSA have been presented.&lt;/p&gt;

&lt;p&gt;&amp;nbsp;Methods: Balb/c mice were immunized with PSA, which was purified from seminal plasma. Splenocytes of hyperimmunized mice were extracted and fused with Sp2/0 cells. By adding selective HAT medium, hybridoma cells were established and positive clones were selected by ELISA after four times of cloning. The isotypes of produced mAbs were determined by ELISA and then purified from ascitic fluids using Hi-Trap protein G column. The reactivities of the mAbs were examined with the purified PSA and seminal plasma by ELISA and western blot techniques. Furthermore, the reactivities of the mAbs were assessed in Prostate Cancer (PCa), Benign Prostatic Hyperplasia (BPH) and brain cancer tissues by Immunohistochemistry (IHC).&lt;/p&gt;

&lt;p&gt;Results: Five anti-PSA mAbs (clones: 2G2-B2, 2F9-F4, 2D6-E8, IgG1/К) and clones (2C8-E9, 2G3-E2, IgG2a/К) were produced and characterized. All mAbs, except 2F9-F4 detected the expression of PSA in PCa and BPH tissues and none of them reacted with PSA in brain cancer tissue in IHC. Besides, all mAbs could detect a protein band around 33 &lt;em&gt;kDa&lt;/em&gt; in human seminal plasma in western blot.&lt;/p&gt;

&lt;p&gt;Conclusion: These mAbs can specifically recognize PSA and may serve as a component of PSA diagnostic kit in various biological fluids.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>2</FPAGE>
            <TPAGE>7</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Ali Ahmad</Name>
<MidName></MidName>
<Family>Bayat </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Roya</Name>
<MidName></MidName>
<Family>Ghods</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECRDepartment of Molecular Medicine, School of Advanced Medical Technologies, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECRDepartment of Molecular Medicine, School of Advanced Medical Technologies, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>IranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Mahdi</Name>
<MidName></MidName>
<Family>Shabani</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Ahmad Reza</Name>
<MidName></MidName>
<Family>Mahmoudi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Omid</Name>
<MidName></MidName>
<Family>Yeganeh</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Hadi</Name>
<MidName></MidName>
<Family>Hassannia</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Immunology, School of Public Health, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Immunology, School of Public Health, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Ali</Name>
<MidName></MidName>
<Family>Sadeghitabar</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Leila</Name>
<MidName></MidName>
<Family>Balay-Goli</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Farzaneh</Name>
<MidName></MidName>
<Family>Noutash-Haghighat</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Ali reza</Name>
<MidName></MidName>
<Family>Sarrafzadeh</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Pathology, Khatam Al Anbia Hospital</Organization>
</Organizations>
<Universities>
<University></University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Mahmood</Name>
<MidName></MidName>
<Family>Jeddi-Tehrani</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>ELISA</KeyText></KEYWORD><KEYWORD><KeyText>Immunohistochemistry</KeyText></KEYWORD><KEYWORD><KeyText>Monoclonal antibody</KeyText></KEYWORD><KEYWORD><KeyText>Prostate specific antigen</KeyText></KEYWORD><KEYWORD><KeyText>Western blot</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>194.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Stat bite: Estimated worldwide cancer mortality among men, 2002. J Natl Cancer Inst 2005;97(19):1402.##Wang MC, Papsidero LD, Kuriyama M, Valenzuela LA, Murphy GP, Chu TM. Prostate antigen: a new potential marker for prostatic cancer. Prostate 1981;2(1):89-96.##Michel S, Deleage G, Charrier JP, Passagot J, Battail-Poirot N, Sibai G, et al. Anti-free prostate-specific antigen monoclonal antibody epitopes defined by mimotopes and molecular modeling. Clin Chem 1999;45(5):638-650.##Sensabaugh GF. Isolation and characterization of a semen-specific protein from human seminal plasma: a potential new marker for semen identification. J Forensic SciJ Forensic Sci 1978;23(1):106-115.##Lilja H. Structure, function, and regulation of the enzyme activity of prostate-specific antigen. World J UrolWorld J Urol 1993;11(4):188-191.##Stamey TA, Yang N, Hay AR, McNeal JE, Freiha FS, Redwine E. Prostate-specific antigen as a serum marker for adenocarcinoma of the prostate. N Engl J MedN Engl J Med 1987;317(15):909-916.##Nelson MA, Porterfield BW, Jacobs ET, Clark LC. Selenium and prostate cancer prevention. Semin Urol Oncol 1999;17(2):91-96.##Leinonen J, Niemela P, Lovgren J, Bocchi L, Pettersson K, Nevanlinna H, et al. Characterization of monoclonal antibodies against prostate specific antigen produced by genetic immunization. J Immunol MethodsJ Immunol Methods 2004;289(1-2):157-167.##Christensson A, Laurell CB, Lilja H. Enzymatic activity of prostate-specific antigen and its reactions with extracellular serine proteinase inhibitors. Eur J Biochem 1990;194(3):755-763.##Vegvari A, Rezeli M, Sihlbom C, Hakkinen J, Carlsohn E, Malm J, et al. Molecular microheterogeneity of prostate specific antigen in seminal fluid by mass spectrometry. Clin BiochemClin Biochem 2012;45(4-5):331-338.##Zhang WM, Leinonen J, Kalkkinen N, Dowell B, Stenman UH. Purification and characterization of different molecular forms of prostate-specific antigen in human seminal fluid. Clin Chem 1995;41(11):1567-1573.##Lwaleed BA, Greenfield R, Stewart A, Birch B, Cooper AJ. Seminal clotting and fibrinolytic balance: a possible physiological role in the male reproductive system. Thromb HaemostThromb Haemost 2004;92(4):752-766.##Christensson A, Lilja H. Complex formation between protein C inhibitor and prostate-specific antigen in vitro and in human semen. Eur J Biochem 1994;220(1):45-53.##Ruckle HC, Klee GG, Oesterling JE. Prostate-specific antigen: concepts for staging prostate cancer and monitoring response to therapy. Mayo Clin Proc 1994;69(1):69-79.##Bayat AA, Yeganeh O, Ghods R, Zarnani AH, Ardekani RB, Mahmoudi AR, Mahmoudian J, et al. Production and characterization of a murine monoclonal antibody against human ferritin. Avicenna J Med Biotechnol 2013;5(4):212-219.##Hadavi R, Zarnani AH, Ahmadvand N, Mahmoudi AR, Bayat AA, Mahmoudian J, et al. Production of monoclonal antibody against human nestin. Avicenna J Med Biotechnol 2010;2(2):69-77.##Sarial S, Asadi F, Jeddi-Tehrani M, Hadavi R, Bayat AA, Mahmoudian J, et al. A high affinity monoclonal antibody recognizing the light chain of human coagulating factor VII. Hybridoma (Larchmt) 2012;31(6):443-448.##Magklara A, Cheung CC, Asa SL, Diamandis EP. Expression of prostate-specific antigen and human glandular kallikrein 2 in the thyroid gland. Clin Chim Acta 2000;300(1-2):171-180.##Shojaeian S, Allameh A, Zarnani AH, Chamankhah M, Ghods R, Bayat AA, et al. Production and characterization of monoclonal antibodies against the extracellular domain of CA 125. Immunol InvestImmunol Invest 2010;39(2):114-131.##Black MH, Grass CL, Leinonen J, Stenman UH, Diamandis EP. Characterization of monoclonal antibodies for prostate-specific antigen and development of highly sensitive free prostate-specific antigen assays. Clin Chem 1999;45(3):347-354.##Watt KW, Lee PJ, M&#39;Timkulu T, Chan WP, Loor R. Human prostate-specific antigen: structural and functional similarity with serine proteases. Proc Natl Acad Sci USA 1986;83(10):3166-3170.##Wu JT, Zhang P, Wang T, Wilson L, Astill M. Evaluation of free PSA isoforms, PSA complex formation, and specificity of anti-PSA antibodies by HPLC and PAGE-immunoblotting techniques. J Clin Lab AnalJ Clin Lab Anal 1995;9(1):1-14.##Bei R, Paranavitana C, Milenic D, Kashmiri SV, Schlom J. Generation, purification, and characterization of a recombinant source of human prostate-specific antigen. J Clin Lab Anal 1995;9(4):261-268.##Kise H, Nishioka J, Satoh K, Okuno T, Kawamura J, Suzuki K. Measurement of protein C inhibitor in seminal plasma is useful for detecting agenesis of seminal vesicles or the vas deferens. J Androl 2000;2(21):207-212.##D&#39;Amico F, Skarmoutsou E, Stivala F. State of the art in antigen retrieval for immunohistochemistry. J Immunol Methods 2009;341(1-2):1-18.##Baumgart Y, Otto A, Schafer A, Usbeck E, Cott C, Schott A, et al. Characterization of novel monoclonal antibodies for prostate-specific antigen (PSA) with potency to recognize PSA bound to alpha 2-macroglobulin. Clinical Chem 2005;51(1):84-92.##Lampe MI, Molkenboer-Kuenen JD, Oosterwijk E. Development of new prostate specific monoclonal antibodies. Prostate 2004;58(3):225-231.##Liu H, Moy P, Kim S, Xia Y, Rajasekaran A, Navarro V, et al. Monoclonal antibodies to the extracellular domain of prostate-specific membrane antigen also react with tumor vascular endothelium. Cancer Res 1997;57(17):3629-3634.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Comparative Analysis of Prostate Cancer Gene Regulatory Networks via Hub Type Variation</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: Prostate cancer is one of the most widespread cancers in men and is fundamentally a genetic disease. Identifying regulators in cancer using novel systems biology approaches will potentially lead to new insight into this disease. It was sought to address this by inferring gene regulatory networks (GRNs). Moreover, dynamical analysis of GRNs can explain how regulators change among different conditions, such as cancer subtypes.&lt;/p&gt;

&lt;p&gt;Methods: In our approach, independent gene regulatory networks from each prostate state were reconstructed using one of the current state-of-art reverse engineering approaches. Next, crucial genes involved in this cancer were highlighted by analyzing each network individually and also in comparison with each other.&lt;/p&gt;

&lt;p&gt;Results: In this paper, a novel network-based approach was introduced to find critical transcription factors involved in prostate cancer. The results led to detection of 38 essential transcription factors based on hub type variation. Additionally, experimental evidence was found for 29 of them as well as 9 new transcription factors.&lt;/p&gt;

&lt;p&gt;Conclusion: The results showed that dynamical analysis of biological networks may provide useful information to gain better understanding of the cell.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>8</FPAGE>
            <TPAGE>15</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Pegah</Name>
<MidName></MidName>
<Family>Khosravi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of TehranSchool of Biological Sciences, Institute for Research in Fundamental Sciences (IPM)</Organization>
</Organizations>
<Universities>
<University>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of TehranSchool of Biological Sciences, Institute for Research in Fundamental Sciences (IPM)</University>
</Universities>
<Countries>
<Country>IranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Vahid H.</Name>
<MidName></MidName>
<Family>Gazestani</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Institute of Parasitology, McGill University, Montreal </Organization>
</Organizations>
<Universities>
<University>Institute of Parasitology, McGill University, Montreal </University>
</Universities>
<Countries>
<Country>Canada</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Mohammad</Name>
<MidName></MidName>
<Family>Akbarzadeh</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</Organization>
</Organizations>
<Universities>
<University>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Samira</Name>
<MidName></MidName>
<Family>Mirkhalaf </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</Organization>
</Organizations>
<Universities>
<University>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Mehdi</Name>
<MidName></MidName>
<Family>Sadeghi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM)National Institute of Genetic Engineering and Biotechnology (NIGEB)</Organization>
</Organizations>
<Universities>
<University>School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM)National Institute of Genetic Engineering and Biotechnology (NIGEB)</University>
</Universities>
<Countries>
<Country>IranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Bahram</Name>
<MidName></MidName>
<Family>Goliaei</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</Organization>
</Organizations>
<Universities>
<University>Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Gene regulatory networks</KeyText></KEYWORD><KEYWORD><KeyText>Prostate cancer</KeyText></KEYWORD><KEYWORD><KeyText>Transcription factors</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>195.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Vogelstein B, Kinzler KW. Cancer genes and the pathways they control. Nat Med 2004;10(8):789-799. ##Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabasi AL. The human disease network. Proc Natl Acad Sci USA 2007;104(21):8685-8690. ##Paik H, Heo HS, Ban HJ, Cho SB. Unraveling human protein interaction networks underlying co-occurrences of diseases and pathological conditions. J Transl Med 2014;12:99. ##Barabasi AL, Gulbahce N, Loscalzo J. Network medicine: a network-based approach to human disease. Nat Rev Genet 2011;12(1):56-68. ##Margolin AA, Nemenman I, Basso K, Wiggins C, Stolovitzky G, Dalla Favera R, et al. ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC Bioinformatics 2006;7 Suppl 1:S7.##Faith JJ, Hayete B, Thaden JT, Mogno I, Wierzbowski J, Cottarel G, et al. Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles. PLoS Biol 2007;5(1):e8. ##Butte AJ, Kohane IS. Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements. Pac Symp Biocomput 2000:418-429. ##Huang S, Ingber DE. A non-genetic basis for cancer progression and metastasis: self-organizing attractors in cell regulatory networks. Breast Dis 2006;26:27-54. ##Kallioniemi O. Functional genomics and transcriptomics of prostate cancer: promises and limitations. BJU Int 2005;96 Suppl 2:10-15. ##Jiang J, Cui W, Vongsangnak W, Hu G, Shen B. Post genome-wide association studies functional characterization of prostate cancer risk loci. BMC Genomics 2013;14 Suppl 8:S9.##Tang Y, Yan W, Chen J, Luo C, Kaipia A, Shen B. Identification of novel microRNA regulatory pathways associated with heterogeneous prostate cancer. BMC Syst Biol 2013;7 Suppl 3:S6.##Ideker T, Sharan R. Protein networks in disease. Genome Res 2008;18(4):644-652. ##Taylor IW, Linding R, Warde-Farley D, Liu Y, Pesquita C, Faria D, et al. Dynamic modularity in protein interaction networks predicts breast cancer outcome. Nat Biotechnol 2009;27(2):199-204.##Brahmachari SK. Introducing the medical bioinformatics in Journal of Translational Medicine. J Transl Med 2012;10:202.##Friedman N. Inferring cellular networks using probabilistic graphical models. Science 2004;303(5659):799-805. ##Schafer J, Strimmer K. An empirical Bayes approach to inferring large-scale gene association networks. Bioinformatics 2005;21(6):754-764.##Butte AJ, Tamayo P, Slonim D, Golub TR, Kohane IS. Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. Proc Natl Acad Sci USA 2000;97(22):12182-12186. ##Basso K, Margolin AA, Stolovitzky G, Klein U, Dalla-Favera R, Califano A. Reverse engineering of regulatory networks in human B cells. Nat Genet 2005;37(4):382-390. ##Marbach D, Costello JC, Kuffner R, Vega NM, Prill RJ, Camacho DM, et al. Wisdom of crowds for robust gene network inference. Nat Methods 2012;9(8):796-804.##Chandran UR, Ma C, Dhir R, Bisceglia M, Lyons-Weiler M, Liang W, et al. Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process. BMC Cancer 2007;7:64. ##Smyth GK. Limma: linear models for microarray data. In: Huber W, editor. Bioinformatics and computational biology solutions using R and bioconductor. New York: Springer; 2005. p. 397-420.##Freeman LC. Set of measures of centrality based on betweenness. Sociometry 1977;40(1):35-41. ##Girvan M, Newman MEJ. Community structure in social and biological networks. Proc Natl Acad Sci USA 2002;99(12):7821-7826.##Yu HY, Kim PM, Sprecher E, Trifonov V, Gerstein M. The importance of bottlenecks in protein networks: Correlation with gene essentiality and expression dynamics. PLoS Comput Biol 2007;3(4):713-720. ##Lin CY, Chin CH, Wu HH, Chen SH, Ho CW, Ko MT. Hubba: hub objects analyzer--a framework of interactome hubs identification for network biology. Nucleic Acids Res 2008;36(Web Server issue):W438-443. ##Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 2003;13(11):2498-2504.##Cline MS, Smoot M, Cerami E, Kuchinsky A, Landys N, Workman C, et al. Integration of biological networks and gene expression data using Cytoscape. Nat Protoc 2007;2(10):2366-2382. ##Watts DJ, Strogatz SH. Collective dynamics of &#39;small-world&#39; networks. Nature 1998;393(6684):440-442.##Barabasi AL, Albert R. Emergence of scaling in random networks. Science 1999;286(5439):509-512. ##Han JD, Bertin N, Hao T, Goldberg DS, Berriz GF, Zhang LV, et al. Evidence for dynamically organized modularity in the yeast protein-protein interaction network. Nature 2004;430(6995):88-93.##Reimand J, Bader GD. Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers. Mol Syst Biol 2013;9:637. ##Ergun A, Lawrence CA, Kohanski MA, Brennan TA, Collins JJ. A network biology approach to prostate cancer. Mol Syst Biol 2007;3:82.##Vaquerizas JM, Kummerfeld SK, Teichmann SA, Luscombe NM. A census of human transcription factors: function, expression and evolution. Nat Rev Genet 2009;10(4):252-263. ##Kummerfeld SK, Teichmann SA. DBD: a transcription factor prediction database. Nucleic Acids Res 2006;34: D74-D81.##Dunn R, Dudbridge F, Sanderson CM. The use of edge-betweenness clustering to investigate biological function in protein interaction networks. BMC Bioinformatics 2005;6:39.##Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, Gerstein M. Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 2004;431(7006):308-312. ##Chen CH, Huang PH, Chu PC, Chen MC, Chou CC, Wang D, et al. Energy restriction-mimetic agents induce apoptosis in prostate cancer cells in part through epigenetic activation of KLF6 tumor suppressor gene expression. J Biol Chem 2011;286(12):9968-9976. ##Narla G, Heath KE, Reeves HL, Li D, Giono LE, Kimmelman AC, et al. KLF6, a candidate tumor suppressor gene mutated in prostate cancer. Science 2001;294(5551):2563-2566. ##van der Heul-Nieuwenhuijsen L, Dits NF, Jenster G. Gene expression of forkhead transcription factors in the normal and diseased human prostate. BJU Int 2009;103(11):1574-1580.##Mazaris E, Tsiotras A. Molecular pathways in prostate cancer. Nephrourol Mon 2013;5(3):792-800.##Reed JA, Lin Q, Chen D, Mian IS, Medrano EE. SKI pathways inducing progression of human melanoma. Cancer Metastasis Rev 2005;24(2):265-272.##Skinner HG, Schwartz GG. Serum calcium and incident and fatal prostate cancer in the National Health and Nutrition Examination Survey. Cancer Epidemiol Biomarkers Prev 2008;17(9):2302-2305.##Ferbus D, Bovin C, Validire P, Goubin G. The zinc finger protein OZF (ZNF146) is overexpressed in colorectal cancer. J Pathol 2003;200(2):177-182.##Henrich KO, Fischer M, Mertens D, Benner A, Wiedemeyer R, Brors B, et al. Reduced expression of CAMTA1 correlates with adverse outcome in neuroblastoma patients. Clin Cancer Res 2006;12(1):131-138.##Smith R, Owen LA, Trem DJ, Wong JS, Whangbo JS, Golub TR, et al. Expression profiling of EWS/FLI identifies NKX2.2 as a critical target gene in Ewing&#39;s sarcoma. Cancer Cell 2006;9(5):405-416. ##Nagel S, Kaufmann M, Scherr M, Drexler HG, MacLeod RA. Activation of HLXB9 by juxtaposition with MYB via formation of t(6;7)(q23;q36) in an AML-M4 cell line (GDM-1). Genes, Chromosomes Cancer 2005;42(2):170-178. ##Lian ZQ, Wang Q, Li WP, Zhang AQ, Wu L. Screening of significantly hypermethylated genes in breast cancer using microarray-based methylated-CpG island recovery assay and identification of their expression levels. Int J Oncol 2012;41(2):629-638. ##Kim YJ, Yoon HY, Kim JS, Kang HW, Min BD, Kim SK, et al. HOXA9, ISL1 and ALDH1A3 methylation patterns as prognostic markers for nonmuscle invasive bladder cancer: array-based DNA methylation and expression profiling. Int J Cancer 2013;133(5):1135-1142.##</REF>
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    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Effects of Combined Soy Isoflavone Extract and Docetaxel Treatment on Murine 4T1 Breast Tumor Model</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: Emergence of drug resistance has brought major problems in chemotherapy. Using nutrients in combination with chemotherapy could be beneficial for improvement of sensitivity of tumors to drug resistance. Soybean-derived isoflavones have been suggested as chemopreventive agents for certain types of cancer, particularly breast cancer. In this study, the synergistic effects of soy isoflavone extract in combination with docetaxel in murine 4T1 breast tumor model were investigated.&lt;/p&gt;

&lt;p&gt;Methods: In this study, mice were divided into 4 groups (15 mice per group) of control, the dietary Soy Isoflavone Extract (SIE, 100 &lt;em&gt;mg/kg&lt;/em&gt; diet), the Docetaxel (DOCE, 10 &lt;em&gt;mg/kg&lt;/em&gt;) injection and the combination of dietary soy isoflavone extract and intravenous docetaxel injection (DOCE+SIE). After 3 injections of docetaxel (once a week), 7 mice were sacrificed to analyze MKI67 gene and protein expressions and the rest were monitored for diet consumption, tumor growth and survival rates.&lt;/p&gt;

&lt;p&gt;Results: In DOCE+SIE group, diet consumption was significantly higher than DOCE group. While lifespan showed a trend towards improvement in DOCE+SIE group, no significant difference was observed among the 4 studied groups. Tumor volume was not significantly affected in treated groups. A lower but not significant MKI67 protein expression was detected in western blot in DOCE+SIE group. The mRNA expression was not significantly different among groups.&lt;/p&gt;

&lt;p&gt;Conclusion: The results suggest that the combination of soy isoflavone as an adjunct to docetaxel chemotherapy can be effective in improving diet consumption in breast cancer.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>16</FPAGE>
            <TPAGE>21</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Ehsan</Name>
<MidName></MidName>
<Family>Hejazi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Javad</Name>
<MidName></MidName>
<Family>Nasrollahzadeh </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Ramina</Name>
<MidName></MidName>
<Family>Fatemi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Leila</Name>
<MidName></MidName>
<Family>Barzegar-Yar MohamadI</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Monoclonal Antibody Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Kioomars</Name>
<MidName></MidName>
<Family>Saliminejad</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Reproductive Biotechnology Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Reproductive Biotechnology Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Zohre</Name>
<MidName></MidName>
<Family>Amiri</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Basic Sciences and Cellular and Molecular Nutrition, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Basic Sciences and Cellular and Molecular Nutrition, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Masoud</Name>
<MidName></MidName>
<Family>Kimiagar</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Clinical Nutrition and Dietetics, School of Nutrition Sciences and Food Technology, Shahid Beheshti University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Mohammad</Name>
<MidName></MidName>
<Family>Houshyari</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Radiation Oncology, Shohada Tajrish Hospital, Shahid Beheshti University of Medical Science</Organization>
</Organizations>
<Universities>
<University>Department of Radiation Oncology, Shohada Tajrish Hospital, Shahid Beheshti University of Medical Science</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Maryam</Name>
<MidName></MidName>
<Family>Tavakoli</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Farah</Name>
<MidName></MidName>
<Family>Idali</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</Organization>
</Organizations>
<Universities>
<University>Reproductive Immunology Research Center, Avicenna Research Institute, ACECR</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Breast cancer</KeyText></KEYWORD><KEYWORD><KeyText>Docetaxel</KeyText></KEYWORD><KEYWORD><KeyText>Soy isoflavone extract</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>196.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Farinotti M, Vacchi L, Simi S, Di Pietrantonj C, Brait L, Filippini G. Dietary interventions for multiple sclerosis. Cochrane Database Syst Rev 2012;12:CD004192.##Acar A, Ugur Cevik M, Evliyaoglu O, Uzar E, Tamam Y, Arikanoglu A, et al. Evaluation of serum oxidant/ antioxidant balance in multiple sclerosis. Acta Neurol Belg 2012;112(3):275-280.##McDowell TY, Amr S, Culpepper WJ, Langenberg P, Royal W, Bever C, et al. Sun exposure, vitamin D and age at disease onset in relapsing multiple sclerosis. Neuroepidemiology 2011;36(1):39-45.##Ma Y, Wang J, Liu L, Zhu H, Chen X, Pan S,et al. Genistein potentiates the effect of arsenic trioxide against human hepatocellular carcinoma: role of Akt and nuclear factor-kappaB. Cancer Lett 2011;301(1):75-84.##Kampman MT, Steffensen LH. The role of vitamin D in multiple sclerosis. J Photochem Photobiol B 2010;101(2):137-141.##Hu XJ, Xie MY, Kluxen FM, Diel P. Genistein modulates the anti-tumor activity of cisplatin in MCF-7 breast and HT-29 colon cancer cells. Arch Toxicol 2014;88(3):625-635.##Runia TF, Hop WC, de Rijke YB, Buljevac D, Hintzen RQ. Lower serum vitamin D levels are associated with a higher relapse risk in multiple sclerosis. Neurology 2012;79(3):261-266.##Ullah MF, Ahmad A, Zubair H, Khan HY, Wang Z, Sarkar FH, et al. Soy isoflavone genistein induces cell death in breast cancer cells through mobilization of endogenous copper ions and generation of reactive oxygen species. Mol Nutr Food Res 2011;55(4):553-559.##Kim HA, Jeong KS, Kim YK.s Soy extract is more potent than genistein on tumor growth inhibition. Anticancer Res 2008;28(5A):2837-2841.##Grant WB. The prevalence of multiple sclerosis in 3 US communities: the role of vitamin D. Prev Chronic Dis 2010;7(4):A89.##Reeves PG, Nielsen FH, Fahey GC Jr. AIN-93 purified diets for laboratory rodents: final report of the American Institute of Nutrition ad hoc writing committee on the reformulation of the AIN-76A rodent diet. J Nutr 1993;123(11):1939-1951.##Lindahl G, Saarinen N, Abrahamsson A, Dabrosin C. Tamoxifen, flaxseed, and the lignan enterolactone increase stroma- and cancer cell-derived IL-1Ra and decrease tumor angiogenesis in estrogen-dependent breast cancer. Cancer Res 2011;71(1):51-60.##Ju YH, Allred CD, Allred KF, Karko KL, Doerge DR, Helferich WG. Physiological concentrations of dietary genistein dose-dependently stimulate growth of estrogen-dependent human breast cancer (MCF-7) tumors implanted in athymic nude mice. J Nutr 2001;131(11):2957-2962.##Verweij J, de Jonge MJ. Achievements and future of chemotherapy. Eur J Cancer 2000;36(12):1479-1487.##Banerjee S, Zhang Y, Ali S, Bhuiyan M, Wang Z, Chiao PJ, et al. Molecular evidence for increased antitumor activity of gemcitabine by genistein in vitro and in vivo using an orthotopic model of pancreatic cancer. Cancer Res 2005;65(19):9064-9072.##Sarkar FH, Li Y. Using chemopreventive agents to enhance the efficacy of cancer therapy. Cancer Res 2006;66(7):3347-3350.##Rohr UD, Li WW, Ziqiang H, Wainright W, Schindler AE. The effect of fermented soy on blood hematology and cachexia in cancer patients. Horm Mol Biol Clin Investig 2012;12(3):407-418.##Martinez-Montemayor MM, Otero-Franqui E, Martinez J, De La Mota-Peynado A, Cubano LA, Dharmawardhane S. Individual and combined soy isoflavones exert differential effects on metastatic cancer progression. Clin Exp Metastasis 2010;27(7):465-480.##Rohr UD, Gocan AG, Bachg D, Schindler AE. Cancer protection of soy resembles cancer protection during pregnancy. Horm Mol Biol Clin Investig 2010;3(2):391-409.##Shu XO, Zheng Y, Cai H, Gu K, Chen Z, Zheng W, et al. Soy food intake and breast cancer survival. JAMA 2009;302(22):2437-2443.##Guha N, Kwan ML, Quesenberry CP, Jr., Weltzien EK, Castillo AL, Caan BJ. Soy isoflavones and risk of cancer recurrence in a cohort of breast cancer survivors: the life after cancer epidemiology study. Breast Cancer Res Treat 2009;118(2):395-405.##Kimiagar M, Hejazi E. Soy, soy isoflavones and breast cancer risk. Pejoohandeh J 2011;16(2):52-58. Persian.##van Duursen MB, Nijmeijer SM, de Morree ES, de Jong PC, van den Berg M. Genistein induces breast cancer-associated aromatase and stimulates estrogen-dependent tumor cell growth in in vitro breast cancer model. Toxicology 2011;289(2-3):67-73.##Choi EJ, Kim GH. Daidzein causes cell cycle arrest at the G1 and G2/M phases in human breast cancer MCF-7 and MDA-MB-453 cells. Phytomedicine 2008;15(9):683-690.##Cox B, Kotlyar M, Evangelou AI, Ignatchenko V, Ignatchenko A, Whiteley K, et al. Comparative systems biology of human and mouse as a tool to guide the modeling of human placental pathology. Mol Syst Biol 2009;5:279.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Intravenous Transplantation of Very Small Embryonic Like Stem Cells in Treatment of Diabetes Mellitus</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: Diabetes Mellitus (DM), simply known as diabetes, refers to a group of metabolic diseases in which there are high&amp;nbsp;blood sugar&amp;nbsp;levels over a prolonged period. In this study, the feasibility and safety of intravenous transplantation of Very Small Embryonic Like stem cells (VSELs) were investigated for diabetes repair, and finally the migration and distribution of these cells in hosts were observed.&lt;/p&gt;

&lt;p&gt;Methods: Mouse bone marrow VSELs were isolated by Fluorescent Activating Cell Sorting (FACS) method by using fluorescent antibodies against CD45, CXCR4 and Sca1 markers. Sorted cells were analyzed for expression of oct4 and SSEA1 markers with immunocytochemistry staining method. To determine multilineage differentiation, sorted cells were differentiated to Schwann, osteocyte and beta cells. Ten days after the establishment of a mouse model of pancreas necrosis, DiI-labeled VSELs were injected into these mice &lt;em&gt;via&lt;/em&gt; tail vein. Pancreases were harvested 4 weeks after transplantation and the sections of these tissues were observed under fluorescent microscope.&lt;/p&gt;

&lt;p&gt;Results: It was proved that CD45-, CXCR4+, and Sca1+ sorted cells express oct4 and SSEA1. Our results revealed that intravenously implanted VSELs could migrate into the pancreas of hosts and survive in the diabetic pancreas. In treated groups, blood glucose decreased significantly for at least two month and the weights of mice increased gradually.&amp;nbsp;&amp;nbsp;&lt;/p&gt;

&lt;div&gt;
&lt;p&gt;Conclusion: This study provides a strategy for using VSELs for curing diabetes and other regenerative diseases, and the strategy is considered an alternative for other stem cell types.&lt;/p&gt;
&lt;/div&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>22</FPAGE>
            <TPAGE>31</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Morteaz</Name>
<MidName></MidName>
<Family>Abouzaripour</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Faculty of Medicine, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Faculty of Medicine, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Iraj</Name>
<MidName></MidName>
<Family>Ragerdi Kashani</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Faculty of Medicine, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Faculty of Medicine, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Parichehr</Name>
<MidName></MidName>
<Family>Pasbakhsh</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Faculty of Medicine, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Faculty of Medicine, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Nader</Name>
<MidName></MidName>
<Family>Atlasy</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Faculty of Medicine, Tehran University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Faculty of Medicine, Tehran University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Diabetes mellitus</KeyText></KEYWORD><KEYWORD><KeyText>Transplantation</KeyText></KEYWORD><KEYWORD><KeyText>Very small embryonic like stem cells</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>197.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Liew CG, Andrews PW. Stem cell therapy to treat diabetes mellitus. Rev Diabet Stud 2008;5(4):203-219.##Phuc Pham Van (2011). Stem Cell Therapy for Islet Regeneration, Stem Cells in Clinic and Research, Dr. Ali Gholamrezanezhad (Ed.), ISBN: 978-953-307-797-0, InTech, Available from: http://www.intechopen.com/books/stem-cells-in-clinic-and-research/stem-cell-therapy-for-islet-regenerationwww.intechopen. ##Hussain MA, Theise ND. Stem-cell therapy for diabetes mellitus. Lancet 2004;364(9429):203-205.##Kucia M, Reca R, Campbell FR, Zuba-Surma E, Majka M, Ratajczak J, et al. A population of very small embryonic-like (VSEL) CXCR4&amp;plus; SSEA-1&amp;plus; Oct-4 &amp; plus; stem cells identified in adult bone marrow. Leukemia 2006;20(5):857-869.##Wojakowski W, Tendera M, Michałowska A, Majka M, Kucia M, Maślankiewicz K, et al. Mobilization of CD34/ CXCR4+, CD34/CD117+, c-met+ stem cells, and mononuclear cells expressing early cardiac, muscle, and endothelial markers into peripheral blood in patients with acute myocardial infarction. Circulation 2004;110(20):3213-3220.##Kucia M, Dawn B, Hunt G, Guo Y, Wysoczynski M, Majka M, et al. Cells expressing early cardiac markers reside in the bone marrow and are mobilized into the peripheral blood after myocardial infarction. Circ Res 2004;95(12):1191-1199.##Paczkowska E, Larysz B, Rzeuski R, Karbicka A, Jałowiński R, Kornacewicz-Jach Z, et al. Human hematopoietic stem/progenitor-enriched CD34 (+) cells are mobilized into peripheral blood during stress related to ischemic stroke or acute myocardial infarction. Eur J Haematol 2005;75(6):461-467.##Kucia M, Zhang YP, Reca R, Wysoczynski M, Machalinski B, Majka M, et al. Cells enriches in markers of neural tissue-committed stem cells reside in the bone marrow and are mobilized into the peripheral blood following stroke. Leukemia 2006;20(1):18-28.##Halasa M, Baskiewicz-Masiuk M, Dabkowska E, Machalinski B. An efficient two-step method to purify very small embryonic-like (VSEL) stem cells from umbilical cord blood (UCB). Folia Histochemica Cytobiologica 2008;46.(2):239-238.##Ratajczak MZ, Zuba-Surma EK, Machalinski B, Ratajczak J, Kucia M. Very small embryonic-like (VSEL) stem cells: purification from adult organs, characterization, and biological significance. Stem Cell Rev 2008;4(2):89-99.##Ceradini DJ, Kulkarni AR, Callaghan MJ, Tepper OM, Bastidas N, Kleinman ME, et al. Progenitor cell trafficking is regulated by hypoxic gradients through HIF-1 induction of SDF-1. Nat Med 2004;10(8):858-864.##Ponomaryov T, Peled A, Petit I, Taichman RS, Habler L, Sandbank J, et al. Induction of the chemokine stromal-derived factor-1 following DNA damage improves human stem cell function. J Clin Invest 2000;106(11):1331-1339.##Takahashi T, Kalka C, Masuda H, Chen D, Silver M, Kearney M, et al. Ischemia- and cytokine-induced mobilization of bone marrow-derived endothelial progenitor cells for neovascularization. Nat Med 1999;5(4):434-438.##T&#246;gel F, Isaac J, Hu Z, Weiss K, Westenfelder C. Renal SDF-1 signals mobilization and homing of CXCR4-positive cells to the kidney after ischemic injury. Kidney Int 2005;67(5):1772-1784.##Shin DM, Zuba-Surma EK, Wu W, Ratajczak J, Wysoczynski M, Ratajczak MZ, et al. Novel epigenetic mechanisms that control pluripotency and quiescence of adult bone marrow-derived Oct 4 &amp; plus; very small embryonic-like stem cells. Leukemia 2009;23(11):2042-2051.##Annaloro C, Onida F, Lambertenghi Deliliers G. Autologous hematopoietic stem cell transplantation in autoimmune diseases. Expert Rev Hematol 2009;2(6):699-715.##Rosato E, Pisarri S, Salsano F. Current strategies for the treatment of autoimmune diseases. J Biol Regul Homeost Agents 2010;24(3):251-259.##Karussis D, Karageorgiou C, Vaknin-Dembinsky A, Gowda-Kurkalli B, Gomori JM, Kassis I, et al. Safety and immunological effects of mesenchymal stem cell transplantation in patients with multiple sclerosis and amyotrophic lateral sclerosis. Arch Neurol 2010;67(10):1187-1194.##Szodoray P, Varoczy L, Szegedi G, Zeher M. Autologous stem cell transplantation in autoimmune and rheumatic  diseases: from the molecular background to clinical applications. Scand J Rheumatol 2010;39(1):1-12.##Nagaya N, Fujii T, Iwase T, Ohgushi H, Itoh T, Uematsu M, et al. Intravenous administration of mesenchymal stem cells improves cardiac function in rats with acute myocardial infarction through angiogenesis and myogenesis. Am J Physiol Heart Circ Physiol 2004;287(6):H2670-2676.##Mazo M, Planat-benard V, Abizanda G, Pelacho B, L&#233;obon B, Gavira JJ, et al. Transplantation of adipose derived stromal cells is associated with functional improvement in a rat model of chronic myocardial infarction. Eur J Heart Fail 2008;10(5):454-462.##Mazo M, Gavira JJ, Abizanda G, Moreno C, Ecay M, Soriano M, et al. Transplantation of mesenchymal stem cells exerts a greater long-term effect than bone marrow  mononuclear cells in a chronic myocardial infarction model in rat. Cell Transplant 2010;19(3):313-328.##Mark AL, Sun Z, Warren DS, Lonze BE, Knabel MK, Melville Williams GM, et al. Stem cell mobilization is life saving in an animal model of acute liver failure. Ann Surg 2010;252(4):591-596.##Shi XL, Gu JY, Han B, Xu HY, Fang L, Ding YT. magnetically labeled mesenchymal stem cells after autologous transplantation into acutely injured liver. World J Gastroenterol 2010;16(29):3674-3679.##Walker PA, Shah SK, Jimenez F, Gerber MH, Xue H, Cutrone R, et al. Intravenous multipotent adult progenitor cell therapy for traumatic brain injury: preserving the blood brain barrier via an interaction with splenocytes. Exp Neurol 2010;225(2):341-352.##Zhang H, Liu Z, Li R, Wang D, Liu W, Li J, et al. Transplantation of embryonic small hepatocytes induces regeneration of injured liver in adult rat. Transplant Proc 2009;41(9):3887-3892.##Li ZH, Liao W, Cui XL, Zhao Q, Liu M, Chen YH, et al. Intravenous transplantation of allogeneic bone marrow mesenchymal stem cells and its directional migration to the necrotic femoral head. Int J Med Sci 2011;8(1):74-83.##Sordi V, Malosio ML, Marchesi F, Mercalli A, Melzi R, Giordano T, et al. Bone marrow mesenchymal stem cells express a restricted set of functionally active chemokine receptors capable of promoting migration to pancreatic islets. Blood 2005;106(2):419-427. ##Gao F, Wu DQ, Hu YH, Jin GX. Extracellular matrix gel is necessary for in vitro cultivation of insulin producing cells from human umbilical cord blood derived mesenchymal stem cells. Chin Med J (Engl) 2008;121(9):811-818. ##Parekh VS, Joglekar MV, Hardikar AA. Differentiation of human umbilical cord blood-derived mononuclear cells to endocrine pancreatic lineage. Differentiation  2009;78(4):232-240.##Wang HS, Shyu JF, Shen WS, Hsu HC, Chi TC, Chen CP, et al. Transplantation of insulin-producing cells derived from umbilical cord stromal mesenchymal stem cells to treat NOD mice. Cell Transplant 2011;20(3):455-466.##Phuc PV, Nhung TH, Loan DT, Chung DC, Ngoc PK. Differentiating of banked human umbilical cord blood-derived mesenchymal stem cells into insulin-secreting cells. In Vitro Cell Dev Biol Anim 2011;47(1):54-63. ##Kadam S, Muthyala S, Nair P, Bhonde R. Human placenta-derived mesenchymal stem cells and islet-like cell clusters generated from these cells as a novel source for stem cell therapy in diabetes. Rev Diabet Stud 2010;7(2):168-182.##Sun Y, Chen L, Hou XG, Hou WK, Dong JJ, Sun L, et al. Differentiation of bone marrow-derived mesenchymal stem cells from diabetic patients into insulin-producing cells in vitro. Chin Med J (Engl) 2007;120(9):771-776. ##Xie QP, Huang H, Xu B, Dong X, Gao SL, Zhang B, et al. Human bone marrow mesenchymal stem cells differentiate into insulin-producing cells upon microenvironmental manipulation in vitro. Differentiation 2009;77(5):483-491.##Phadnis SM, Joglekar MV, Dalvi MP, Muthyala S, Nair PD, Ghaskadbi SM, et al. Human bone marrow-derived mesenchymal cells differentiate and mature into endocrine pancreatic lineage in vivo Cytotherapy 2011;13(3):279-293. ##Li M, Abraham NG, Vanella L, Zhang Y, Inaba M, Hosaka N, et al. Successful modulation of type 2 diabetes in db mice with intra-bone marrow–bone marrow transplantation plus concurrent thymic transplantation. J Autoimmun 2010;35(4):414-423.##Trovato L, De Fazio R, Annunziata M, Sdei S, Favaro E, Ponti R, et al. Pluripotent stem cells isolated from human amniotic fluid and differentiation into pancreatic beta-cells. J Endocrinol Invest 2009;32(11):873-876.##Chao KC, Chao KF, Fu YS, Liu SH. Islet-like clusters derived from mesenchymal stem cells in Wharton&#39;s Jelly of the human umbilical cord for transplantation to control type 1 diabetes. PLoS One 2008;3(1):e1451. ##Wu LF, Wang NN, Liu YS, Wei X. Differentiation of Wharton&#39;s jelly primitive stromal cells into insulin-producing cells in comparison with bone marrow mesenchymal stem cells Tissue Eng Part A 2009;15(10):2865-2873.##Kadam SS, Sudhakar M, Nair PD, Bhonde RR. Reversal of experimental diabetes in mice by transplantation of neo-islets generated from human amnion derived mesenchymal stromal cells using immuno-isolatory macrocapsules. Cytotherapy 2010;12(8):982-991.##Chandra V, G S, Phadnis S, Nair PD, Bhonde RR. Generation of pancreatic hormone-expressing islet-like cell aggregates from murine adipose tissue-derived stem cells. Stem Cells 2009;27(8):1941-1953. ##Zhang YH, Wang HF, Liu W, Wei B, Bing LJ, Gao YM. Insulin-producing cells derived from rat bone marrow and their autologous transplantation in the duodenal wall for treating diabetes. Anat Rec (Hoboken) 2009;292(5):728-735.##Wong RS. Mesenchymal stem cells: angels or demons? J Biomed Biotechnol 2011;2011:459510.##Rackham CL, Dhadda PK, Chagastelles PC, Simpson SJ, Dattani AA, Bowe JE, et al. Pre-culturing islets with mesenchymal stromal cells using a direct contact configuration is beneficial for transplantation outcome in diabetic mice. Cytotherapy 2013;15(4):449-459.##Ito T, Itakura S, Todorov I, Rawson J, Asari S, Shintaku J, et al. Mesenchymal stem cell and islet co-transplantation promotes graft revascularization and function. Transplantation 2010;89(12):1438-1445. ##Lin P, Chen L, Yang N, Sun Y, Xu YX. Evaluation of stem cell differentiation in diabetic rats transplanted with bone marrow mesenchymal stem cells. Transplant Proc 2009;41(5):1891-1893. ##Kodama M, Takeshita F, Kanegasaki S, Ochiya T, Quinn G. Pancreatic endocrine and exocrine cell ontogeny from renal capsule transplanted embryonic stem cells in streptozocin-injured mice. J Histochem Cytochem 2008;56(1):33-44. ##Kodama M, Tsukamoto K, Yoshida K, Aoki K, Kanegasaki S, Quinn G. Embryonic stem cell transplantation correlates with endogenous neurogenin 3 expression and pancreas regeneration in streptozotocine-injured mice. J Histochem Cytochem 2009;57(12):1149-1158.##Ratajczak MZ, Zuba-Surma EK, Wojakowski W, Ratajczak J, Kucia M. Bone marrow-home of versatile stem cells. Transfus Med Hemother 2008;35(3):248-259.##Huang Y, Kucia M, Hussain LR, Wen Y, Xu H, Yan J, et al. Bone marrow transplantation temporarily improves pancreatic function in streptozotocin-induced diabetes: potential involvement of very small embryonic-like cells. Transplantation 2010;89(6):677-685.##Chu K, Kim M, Jeong SW, Kim SU, Yoon BW. Human neural stem cells can migrate, differentiate, and integrate after intravenous transplantation in adult rats with transient forebrain ischemia. Neurosci Lett  2003;343(2):129-133.##Alipio Z, Liao W, Roemer EJ, Waner M, Fink LM, Ward DC, Ma Y. Reversal of hyperglycemia in diabetic mouse models using induced-pluripotent stem (iPS)-derived pancreatic β-like cells. Proc Natl Acad Sci USA 2010;107(30):13426-13431.##Zalzman M, Gupta S, Giri RK, Berkovich I, Sappal BS, Karnieli O, et al. Reversal of hyperglycemia in mice by using human expandable insulin-producing cells differentiated from fetal liver progenitor cells. Proc Natl Acad Sci USA 2003;100(12):7253-7258.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>ADSCs on PLLA/PCL Hybrid Nanoscaffold and Gelatin Modification: Cytocompatibility and Mechanical Properties</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: Development of tissue engineering and regenerative medicine has led to designing scaffolds and their modification to provide a better microenvironment which mimics the natural niche of the cells. Gelatin surface modification was applied to improve scaffold flexibility and cytocompatibility.&lt;/p&gt;

&lt;p&gt;Methods: PLLA/PCL aligned fibrous scaffold was fabricated using electrospinning method. ADSCs were seeded after O2 plasma treatment and gelatin coating of the scaffolds. The morphological and mechanical properties of blends were assessed by Scanning Electron Microscopy (SEM), tensile test and ATR-FTIR. The cells proliferation was evaluated by MTT assay.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Results: Based on the results, it is supposed that gelatin coating is a brilliant method of surface modification which significantly increases the mechanical properties of scaffold without any changes on the construction or on the direction of nanofibers which conducts cell&amp;rsquo;s elongation. MTT analysis exhibited that ADSCs attachment, viability and proliferation significantly (p&amp;lt;0.05) increased after gelatin treatment.&lt;/p&gt;

&lt;p&gt;Conclusion: Gelatin surface modification is a highly beneficial method to improve cytocompatibility, flexibility and mechanical features of the scaffolds which doesn&amp;rsquo;t affect the nanofibers construction. Proliferation of Adipose Derived Stem Cells (ADSCs) as a remarkable source of stem cells was investigated for the first time on PLLA/PCL hybrid scaffold.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>32</FPAGE>
            <TPAGE>38</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Maedeh</Name>
<MidName></MidName>
<Family>Mashhadikhan </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</Organization>
</Organizations>
<Universities>
<University>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Masoud</Name>
<MidName></MidName>
<Family>Soleimani</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Hematology and Blood Banking, Faculty of Medical Sciences, Tarbiat Modares University</Organization>
</Organizations>
<Universities>
<University>Department of Hematology and Blood Banking, Faculty of Medical Sciences, Tarbiat Modares University</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Kazem</Name>
<MidName></MidName>
<Family>Parivar </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</Organization>
</Organizations>
<Universities>
<University>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Marjan</Name>
<MidName></MidName>
<Family>Yaghmaei</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</Organization>
</Organizations>
<Universities>
<University>Department of Biology, Faculty of Sciences, Science and Research Branch, Islamic Azad University</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Gelatin</KeyText></KEYWORD><KEYWORD><KeyText>Tissue engineering</KeyText></KEYWORD><KEYWORD><KeyText>Tissue scaffold</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>198.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Xu C, Lu W, Bian S, Liang J, Fan Y, Zhang X. Porous collagen scaffold reinforced with surfaced activated PLLA nanoparticles. ScientificWorldJournal 2012;2012:695137.##Cardoso GB, Perea GN, D’Avila MA, Dias CG, Zavaglia CA, Arruda AC. Initial study of electrospinning PCL/ PLLA blends. Adv Mater Phys Chem 2011;1(3):94-98.##Zhao P, Jiang H, Pan H, Zhu K, Chen W. Biodegradable fibrous scaffolds composed of gelatin coated poly(epsilon-caprolactone) prepared by coaxial electrospinning. J Biomed Mater Res A 2007;83(2):372-382.##Shabani I, Haddadi-Asl V, Seyedjafari E, Soleimani M. Cellular infiltration on nanofibrous scaffolds using a modified electrospinning technique. Biochem Biophys Res Commun 2012;423(1):50-54.##Shabani I, Haddadi-Asl V, Seyedjafari E, Babaeijandaghi F, Soleimani M. Improved infiltration of stem cells on electrospun nanofibers. Biochem Biophys Res Commun 2009;382(1):129-133.##He L, Liu B, Xipeng G, Xie G, Liao S, Quan D, et al. Microstructure and properties of nano-fibrous PCL-b-PLLA scaffolds for cartilage tissue engineering. Eur Cell Mater 2009;18:63-74.##Choi NS, Kim CH, Cho KY, Park JK. Morphology and hydrolysis of PCL/PLLA blends compatibilized with P (LLA‐co‐CL) or P (LLA‐b‐CL). J Appl Polym Sci 2002;86(8):1892-1898.##Paul MA, Alexandre M, Deg&#233;e P, Henrist C, Rulmont A, Dubois P. New nanocomposite materials based on plasticized poly (L-lactide) and organo-modified montmorillonites: thermal and morphological study. Polymer 2003;44(2):443-450.##Todo M, Harada A, Tsuji H. Fracture characterizarion of biodegradable PLLA polymer blends. 16th International conference on composite materials. Kyoto, 8-13 July 2007. p. 1-6.##Klump D, Horch RE, Kneser U, Beier JP. Tissue engineering of skeletal muscle. J Cell Mol Med 2010;14(11):2622-2629.##Chen JP, Su CH. Surface modification of electrospun PLLA nanofibers by plasma treatment and cationized gelatin immobilization for cartilage tissue engineering. Acta Biomater 2011;7(1):234-243.##Jahani H, Kaviani S, Hassanpour-Ezatti M, Soleimani M, Kaviani Z, Zonoubi Z. The effect of aligned and random electrospun fibrous scaffolds on rat mesenchymal stem cell proliferation. Cell J 2012;14(1):31-38.##Guo C, Cai N, Dong Y. Duplex surface modification of porous poly (lactic acid) scaffold. Mater Lett 2013;94:11-14.##Kim MS, Jun I, Shin YM, Jang W, Kim SI, Shin H. The development of genipin-crosslinked poly(caprolactone) (PCL)/gelatin nanofibers for tissue engineering applications. Macromol Biosci 2010;10(1):91-100.##Htay MAS. Water vapour transmission and degradation properties of biaxially stretched PCL films and cell-permeable membranes [master&#39;s thesis]. [Singapore]: National University of Singapore 2004. 130 p.##Jin W, Liu L. Micro construction of poly(epsilon-caprolactone)/poly(L-lactic acid) blend film by solution casting under microwave irradiation. Macromol Biosci 2004;4(7):656-664.##Can E, Udenir G, Kanneci AI, Kose G, Bucak S. Investigation of PLLA/PCL blends and paclitaxel release profiles. AAPS PharmSciTech 2011;12(4):1442-1453.##Chamy R, Rosenkranz F. Biodegradation of hazardous and special products [Internet]. Croatia: InTech; 2013 Jun 14. Kodama Y. Degradability: enzymatic and in simulated compost soil of PLLA: PCL blend and on their composite with coconut fiber; [64 pages]. Availiable from: http://www.intechopen.com/books/biodegradation-of-hazardous-and-special-products/degradability-enzymatic-and-in-simulated-compost-soil-of-plla-pcl-blend-and-on-their-composite-with-.##Patricio T, Gloria A, Bartolo P. Mechanical and biological behaviour of PCL and PCL/PLA scaffolds for tissue engineering applications. Chem Eng Trans 2013;32:1645-1650.##Yao M, Deng H, Mai F, Wang K, Zhang Q, Chen F, et al. Modification of poly (lactic acid)/poly (propylene carbonate) blends through melt compounding with maleic anhydride. Express Polym Lett 2011;5:937.##Shang S, Yang F, Cheng X, Walboomers XF, Jansen JA. The effect of electrospun fibre alignment on the behaviour of rat periodontal ligament cells. Eur Cell Mater 2010;19:180-192.##Tseng LF, Mather PT, Henderson JH. Shape-memory-actuated change in scaffold fiber alignment directs stem cell morphology. Acta Biomater 2013;9(11):8790-8801. ##Chew SY, Mi R, Hoke A, Leong KW. The effect of the alignment of electrospun fibrous scaffolds on Schwann cell maturation. Biomaterials 2008;29(6):653-661.##Seyedjafari E, Soleimani M, Ghaemi N, Shabani I. Nanohydroxyapatite-coated electrospun poly (l-lactide) nanofibers enhance osteogenic differentiation of stem cells and induce ectopic bone formation. Biomacromolecules 2010;11(11):3118-3125.##Lin Y, Wang L, Zhang P, Wang X, Chen X, Jing X, et al. Surface modification of poly (L-lactic acid) to improve its cytocompatibility via assembly of polyelectrolytes and gelatin. Acta Biomate 2006;2(2):155-64.##Oraby MA, Waley AI,  El-Dewany AI, Saad EA, Abd El-Hady BM. Electrospinning of gelatin functionalized with silver nanoparticles for nanofiber fabrication. Model Numer Simul Mater Sci 2013;3(4):95-105.##Desimone D, Li W, Roether JA, Schubert DW, Crovace MC, Rodrigues ACM, et al. Biosilicate&#174;–gelatine bone scaffolds by the foam replica technique: development and characterization. Sci Technol Adv Mater 2013;14(4):045008.##Pignatello R. Biomaterials applications for nanomedicine [Internet]. Croatia: InTech; 2011 16 Nov. Gorgieva S, Kokol V. Collagen-vs. gelatine-based biomaterials and their biocompatibility: Review and perspectives; [37 pages]. Availiable from:  http://www.intechopen.com/books/biomaterials-applications-for-nanomedicine/collagen-vs-gelatine-based-biomaterials-and-their-biocompatibility-review-and-perspectives.##Houa X, Zhangb BL, Shea F, Cuia YL, Shib LY, Yaoa KD. Surface of gelatin modified poly (L-lactic acid) film. Chinese J Polym Sci 2003;21(3):277-283.##Cui YL, Hou X, Qi AD, Wang XH, Wang H, Cai KY, et al. Biomimetic surface modification of poly (L‐lactic acid) with gelatin and its effects on articular chondrocytes in vitro. J Biomed Mater Res A 2003;66(4):770-778.##Liu X, Won Y, Ma PX. Porogen-induced surface modification of nano-fibrous poly (L-lactic acid) scaffolds for tissue engineering. Biomaterials 2006;27(21):3980-3987.##Orbay H, Tobita M, Mizuno H. Mesenchymal stem cells isolated from adipose and other tissues: basic biological properties and clinical applications. Stem Cells Int 2012;2012:461718.##Chen HT, Lee MJ, Chen CH, Chuang SC, Chang LF, Ho ML, et al. Proliferation and differentiation potential of human adipose‐derived mesenchymal stem cells isolated from elderly patients with osteoporotic fractures. J Cell Mol Med 2012;16(3):582-592.##Gimble JM, Guilak F, Nuttall ME, Sathishkumar S, Vidal M, Bunnell BA. In vitro differentiation potential of mesenchymal stem cells. Transfus Med Hemother 2008;35(3):228-238.##Zhang Y, Khan D, Delling J, Tobiasch E. Mechanisms underlying the osteo- and adipo-differentiation of human mesenchymal stem cells. ScientificWorldJournal 2012;2012:793823. ##Bakhshandeh B, Soleimani M, Ghaemi N, Shabani I. Effective combination of aligned nanocomposite nanofibers and human unrestricted somatic stem cells for bone tissue engineering. Acta Pharmacologica Sin 2011;32(5):626-636.##Kroehne V, Heschel I, Sch&#252;gner F, Lasrich D, Bartsch J, Jockusch H. Use of a novel collagen matrix with oriented pore structure for muscle cell differentiation in cell culture and in grafts. J Cell Mol Med 2008;12(5a):1640-1648.##Hermanto S, Sumarlin LO, Fatimah W. Differentiation of bovine and porcine gelatin based on spectroscopic and electrophoretic analysis. J Food Pharm Sci 2013;1(3):68-73.##Nguyen T, Lee B. Fabrication and characterization of cross-linked gelatin electro-spun nano-fibers. J Biomed Sci Eng 2010;3(12):1117-1124.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Cloning and Expression of CD19, a Human B-Cell Marker in NIH-3T3 Cell Line</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: CD19 is a pan B cell marker that is recognized as an attractive target for antibody-based therapy of B-cell disorders including autoimmune disease and hematological malignancies. The object of this study was to stably express the human CD19 antigen in the murine NIH-3T3 cell line aimed to be used as an immunogen in our future study.&lt;/p&gt;

&lt;p&gt;Methods: Total RNA was extracted from Raji cells in which high expression of CD19 was confirmed by flow cytometry. Synthesized cDNA was used for CD19 gene amplification by conventional PCR method using Pfu DNA polymerase. PCR product was ligated to pGEM-T Easy vector and ligation mixture was transformed to DH5&amp;alpha; competent bacteria. After blue/white selection, one positive white colony was subjected to plasmid extraction and direct sequencing. Then, CD19 cDNA was sub-cloned into pCMV6-Neo expression vector by double digestion using KpnI and HindIII enzymes. NIH-3T3 mouse fibroblast cell line was subsequently transfected by the construct using Jet-PEI transfection reagent. After 48 hours, surface expression of CD19 was confirmed by flow cytometry and stably transfected cells were selected by G418 antibiotic.&lt;/p&gt;

&lt;p&gt;Results: Amplification of CD19 cDNA gave rise to 1701 bp amplicon confirmed by alignment to reference sequence in NCBI database. Flow cytometric analysis showed successful transient and stable expression of CD19 on NIH-3T3 cells (29 and 93%, respectively).&lt;/p&gt;

&lt;p&gt;Conclusion: Stable cell surface expression of human CD19 antigen in a murine NIH-3T3 cell line may develop a proper immunogene which raises specific anti-CD19 antibody production in the mice immunized sera.&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>39</FPAGE>
            <TPAGE>44</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Hajar</Name>
<MidName></MidName>
<Family>Abbasi-Kenarsari</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Immunology Research Center, Tabriz University of Medical Sciences, Department of Immunology, School of Medicine, Tabriz University of Medical SciencesStudents Research Committee, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Immunology Research Center, Tabriz University of Medical Sciences, Department of Immunology, School of Medicine, Tabriz University of Medical SciencesStudents Research Committee, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>IranIranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Farzaneh</Name>
<MidName></MidName>
<Family>Shafaghat</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Immunology, International Branch of Aras, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Department of Immunology, International Branch of Aras, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Behzad</Name>
<MidName></MidName>
<Family>Baradaran</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Immunology Research Center, Tabriz University of Medical SciencesDepartment of Immunology, School of Medicine, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Immunology Research Center, Tabriz University of Medical SciencesDepartment of Immunology, School of Medicine, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>IranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Ali Akbar</Name>
<MidName></MidName>
<Family>Movassaghpour</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Hematology and Oncology Research Center, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Hematology and Oncology Research Center, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Dariush</Name>
<MidName></MidName>
<Family>Shanehbandi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Immunology Research Center, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Immunology Research Center, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>Iran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Tohid</Name>
<MidName></MidName>
<Family>Kazemi</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Immunology Research Center, Tabriz University of Medical SciencesDepartment of Immunology, School of Medicine, Tabriz University of Medical Sciences</Organization>
</Organizations>
<Universities>
<University>Immunology Research Center, Tabriz University of Medical SciencesDepartment of Immunology, School of Medicine, Tabriz University of Medical Sciences</University>
</Universities>
<Countries>
<Country>IranIran</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>B cell</KeyText></KEYWORD><KEYWORD><KeyText>CD19</KeyText></KEYWORD><KEYWORD><KeyText>Cloning</KeyText></KEYWORD><KEYWORD><KeyText>Gene expression</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>199.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Blanc V, Bousseau A, Caron A, Carrez C, Lutz RJ, Lambert JM. SAR3419: an anti-CD19-Maytansinoid Immunoconjugate for the treatment of B-cell malignancies. Clin Cancer Res 2011;17(20):6448-6458.##van Zelm MC, Reisli I, van der Burg M, Castano D, van Noesel CJ, van Tol MJ, et al. An antibody-deficiency syndrome due to mutations in the CD19 gene. N Engl J Med 2006;354(18):1901-1912.##Tedder TF, Isaacs CM. Isolation of cDNAs encoding the CD19 antigen of human and mouse B lymphocytes. A new member of the immunoglobulin superfamily. J Immunol 1989;143(2):712-717.##Gerber HP, Kung-Sutherland M, Stone I, Morris-Tilden C, Miyamoto J, McCormick R, et al. Potent antitumor activity of the anti-CD19 auristatin antibody drug conjugate hBU12-vcMMAE against rituximab-sensitive and-resistant lymphomas. Blood 2009;113(18):4352-4361.##Awan FT, Lapalombella R, Trotta R, Butchar JP, Yu B, Benson DM Jr, et al. CD19 targeting of chronic lymphocytic leukemia with a novel Fc-domain-engineered monoclonal antibody. Blood 2010;115(6):1204-1213.##Zhou LJ, Ord DC, Omori SA, Tedder TF. Structure of the genes encoding the CD19 antigen of human and mouse B lymphocytes. Immunogenetics 1992;35(2):102-111.##Tsuchiya N, Kuroki K, Fujimoto M, Murakami Y, Tedder TF, Tokunaga K, et al. Association of a functional CD19 polymorphism with susceptibility to systemic sclerosis. Arthritis Rheum 2004;50(12):4002-4007.##Otero DC, Anzelon AN, Rickert RC. CD19 function in early and late B cell development: I. Maintenance of follicular and marginal zone B cells requires CD19-dependent survival signals. J Immunol 2003;170(1):73-83.##Fujimoto M, Poe JC, Jansen PJ, Sato S, Tedder TF. CD19 amplifies B lymphocyte signal transduction by regulating Src-family protein tyrosine kinase activation. J Immunol 1999;162(12):7088-7094.##Kuroki K, Tsuchiya N, Tsao BP, Grossman JM, Fukazawa T, Hagiwara K, et al. Polymorphisms of human CD19 gene: possible association with susceptibility to systemic lupus erythematosus in Japanese. Genes Immun 2002;3(Suppl 1):S21-30.##Hammer O. CD19 as an attractive target for antibody-based therapy. MAbs 2012;4(5):571-577.##Mei HE, Schmidt S, Dorner T. Rationale of anti-CD19 immunotherapy: an option to target autoreactive plasma cells in autoimmunity. Arthritis Res Ther 2012;14(Suppl 5):S1.##Wang K, Wei G, Liu D. CD19: a biomarker for B cell development, lymphoma diagnosis and therapy. Exp Hematol Oncol 2012;1(1):36.##Yazawa N, Hamaguchi Y, Poe JC, Tedder TF. Immunotherapy using unconjugated CD19 monoclonal antibodies in animal models for B lymphocyte malignancies and autoimmune disease. Proc Natl Acad Sci USA 2005;102(42):15178-15183.##Horton HM, Bernett MJ, Pong E, Peipp M, Karki S, Chu SY, et al. Potent in vitro and in vivo activity of an Fc-engineered anti-CD19 monoclonal antibody against lymphoma and leukemia. Cancer Res 2008;68(19):8049-8057.##Cardarelli PM, Rao-Naik C, Chen S, Huang H, Pham A, Moldovan-Loomis MC, et al. A nonfucosylated human antibody to CD19 with potent B-cell depletive activity for therapy of B-cell malignancies. Cancer Immunol Immunother 2010;59(2):257-265.##Ma D, McDevitt MR, Barendswaard E, Lai L, Curcio MJ, Pellegrini V, et al. Radioimmunotherapy for model B cell malignancies using 90Y-labeled anti-CD19 and anti-CD20 monoclonal antibodies. Leukemia 2002;16(1):60-66.##Kohler G, Milstein C. Continuous cultures of fused cells secreting antibody of predefined specificity. Nature 1975;256(5517):495-497.##Yin J1, Li G, Ren X, Herrler G. Select what you need: a comparative evaluation of the advantages and limitations of frequently used expression systems for foreign genes. J Biotechnol 2007;127(3):335-347.##Available at: http://www.iacuc.emory.edu/documents/ 367_Complete_Freunds_Adjuvent.pdf. Accessed on 17 june 2014.##Katz BZ, Herishanu Y. Therapeutic targeting of CD19 in hematological malignancies: past, present, future and beyond. Leuk Lymphoma 2014;55(5):999-1006.##Du X, Beers R, Fitzgerald DJ, Pastan I. Differential cellular internalization of anti-CD19 and -CD22 immunotoxins results in different cytotoxic activity. Cancer Res 2008;68(15):6300-6305.##Apiratmateekul N, Phunpae P, Kasinrerk W. A modified hybridoma technique for production of monoclonal antibodies having desired isotypes. Cytotechnology 2009;60:45-51.##Brown MC, Joaquim TR, Chambers R, Onisk DV, Yin F, Moriango JM, et al. Impact of immunization technology and assay application on antibody performance- A systematic comparative evaluation. PLoS One 2011;6(12):e28718.##Kazemi T, Tahmasebi F, Bayat AA, Mohajer N, Khoshnoodi J, Jeddi-Tehrani M, et al. Characterization of novel murine monoclonal antibodies directed against the extracellular domain of human HER2 tyrosine kinase receptor. Hybridoma (Larchmt) 2011;30(4):347-353.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

<ARTICLE>
    <TitleE>Use of Raman Spectroscopy to Decrease Time for Identifying the Species of Candida Growth in Cultures</TitleE>
    <TitleF></TitleF>
    <TitleLang_ID>2</TitleLang_ID>
    <ABSTRACTS>

        <ABSTRACT>
            <Language_ID>2</Language_ID>
            <CONTENT>&lt;p&gt;Background: The objective of this study is to establish Raman signatures from pure cultures of different Candida species using Raman Spectroscopy (RS) and use these signatures for rapid identification of unknown Candida species.&lt;/p&gt;

&lt;p&gt;Methods: Pure cultures of five Candida species were evaluated using RS to build a limited signature library. &amp;lsquo;Raman Processing&amp;rsquo; (RP) software was used for Principal Component Analysis (PCA) and Differential Functional Analysis (DFA).&lt;/p&gt;

&lt;p&gt;Results: Eleven principal components described at least 95% variance in the spectra. Raman signatures from these known Candida species were able to identify the species of unknown Candida cultures with 100% accuracy.&lt;/p&gt;

&lt;p&gt;Conclusion: Raman spectroscopy can improve early identification of Candida species and may facilitate early optimal antifungal therapy.&lt;/p&gt;

&lt;p style=&quot;text-align:justify&quot;&gt;&amp;nbsp;&lt;/p&gt;
</CONTENT>
        </ABSTRACT>
    </ABSTRACTS>
    <PAGES>
        <PAGE>
            <FPAGE>45</FPAGE>
            <TPAGE>48</TPAGE>
        </PAGE>
    </PAGES>
    <AUTHORS>
        <AUTHOR>
<Name>Nitin</Name>
<MidName></MidName>
<Family>S. Chouthai</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Division of Neonatal-Perinatal Medicine, Wayne State University </Organization>
</Organizations>
<Universities>
<University>Division of Neonatal-Perinatal Medicine, Wayne State University </University>
</Universities>
<Countries>
<Country>United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Anuj</Name>
<MidName></MidName>
<Family>A. Shah </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Division of Neonatal-Perinatal Medicine, Wayne State University</Organization>
</Organizations>
<Universities>
<University>Division of Neonatal-Perinatal Medicine, Wayne State University</University>
</Universities>
<Countries>
<Country>United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Hossein</Name>
<MidName></MidName>
<Family>Salimnia</Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Division of Pathology, Wayne State University</Organization>
</Organizations>
<Universities>
<University>Division of Pathology, Wayne State University</University>
</Universities>
<Countries>
<Country> United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Olena</Name>
<MidName></MidName>
<Family>Palyvoda </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Lumigen Instrument Center, Wayne State University</Organization>
</Organizations>
<Universities>
<University>Lumigen Instrument Center, Wayne State University</University>
</Universities>
<Countries>
<Country>United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Suneetha</Name>
<MidName></MidName>
<Family>Devpura </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Department of Radiation Oncology, Henry Ford Health System</Organization>
</Organizations>
<Universities>
<University>Department of Radiation Oncology, Henry Ford Health System</University>
</Universities>
<Countries>
<Country>United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Michael</Name>
<MidName></MidName>
<Family>Klein </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Pediatric Surgery, Wayne State University </Organization>
</Organizations>
<Universities>
<University>Pediatric Surgery, Wayne State University </University>
</Universities>
<Countries>
<Country>United States of America</Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR><AUTHOR>
<Name>Basim</Name>
<MidName></MidName>
<Family>Asmar </Family>
<NameE></NameE>
<MidNameE></MidNameE>
<FamilyE></FamilyE>
<Organizations>
<Organization>Division of Pediatric Infectious Diseases, Wayne State University </Organization>
</Organizations>
<Universities>
<University>Division of Pediatric Infectious Diseases, Wayne State University </University>
</Universities>
<Countries>
<Country>United States of America </Country>
</Countries>
<EMAILS>
<Email></Email>
</EMAILS>
</AUTHOR>
    </AUTHORS>
    <KEYWORDS>
        <KEYWORD><KeyText>Candida species</KeyText></KEYWORD><KEYWORD><KeyText>Raman</KeyText></KEYWORD><KEYWORD><KeyText>Spectrum analysis</KeyText></KEYWORD>
    </KEYWORDS>
    <PDFFileName>200.pdf</PDFFileName>
    <REFRENCES>
        <REFRENCE>
            <REF>Stoll BJ, Hansen N, Fanaroff AA, Wright LL, Carlo WA, Ehrenkranz RA, et al. Late-onset sepsis in very low birth weight neonates: the experience of the NICHD Neonatal Research Network. Pediatrics 2002;110(2 Pt 1):285-291. ##Greenberg RG, Benjamin DK, Jr., Gantz MG, Cotten CM, Stoll BJ, Walsh MC, et al. Empiric antifungal therapy and outcomes in extremely low birth weight infants with invasive candidiasis. J Pediatrics 2012;161(2):264-269 e2. ##Benjamin DK, Jr., Stoll BJ, Fanaroff AA, McDonald SA, Oh W, Higgins RD, et al. Neonatal candidiasis among extremely low birth weight infants: risk factors, mortality rates, and neurodevelopmental outcomes at 18 to 22 months. Pediatrics 200;117(1):84-92.##Telenti A, Roberts GD. Fungal blood cultures. Eur J Clin Microbiol Infect Dis 1989;8(9):825-831. ##Matthews RC. Early diagnosis of systemic candidal infection. J Antimicrob Chemother 1993;31(6):809-812.##Chan JW, Taylor DS, Zwerdling T, Lane SM, Ihara K, Huser T. Micro-Raman spectroscopy detects individual neoplastic and normal hematopoietic cells. Biophys J 2006;90(2):648-656.##Kast RE, Serhatkulu GK, Cao A, Pandya AK, Dai H, Thakur JS, et al. Raman spectroscopy can differentiate malignant tumors from normal breast tissue and detect early neoplastic changes in a mouse model. Biopolymers 2008;89(3):235-241.##Leslie DG, Kast RE, Poulik JM, Rabah R, Sood S, Auner GW, et al. Identification of pediatric brain neoplasms using Raman spectroscopy. Pediatr Neurosurg 2012;48(2):109-117. ##Gardiner DJ, Graves PR, Bowley HJ. Practical raman spectroscopy. Berlin, New York: Springer-Verlag; 1989. ##Adar F. Molecular spectroscopy workbench-Raman micro imaging-What was a concept in 1975 is now a reality. Spectroscopy 2007;22(11):24-28. ##Ashton L, Lau K, Winder CL, Goodacre R. Raman spectroscopy: lighting up the future of microbial identification. Future Microbiol 2011;6(9):991-997. ##Fridkin SK, Kaufman D, Edwards JR, Shetty S, Horan T. Changing incidence of Candida bloodstream infections among NICU patients in the United States: 1995-2004. Pediatrics 2006;117(5):1680-1687.##Mean M, Marchetti O, Calandra T. Bench-to-bedside review: Candida infections in the intensive care unit. Critical Care 2008;12(1):204. ##Reisner LA, Cao A, Pandya AK. An integrated software system for processing, analyzing, and classifying Raman spectra. Chemometr Intell Lab Syst 2011;105(1):83-90.##De Gelder J, De Gussem K, Vandenabeele P, Moens L. Reference database of Raman spectra of biological molecules. J Raman Spectrosc 2007;38(9):1133-1147.##Movasaghi Z, Rehman S, Rehman IU. Raman spectroscopy of biological tissues. Appl Spectrosc Rev 2007;42(5):493-541.##Ahmad S, Khan Z, Mustafa AS, Khan ZU. Seminested PCR for diagnosis of candidemia: comparison with culture, antigen detection, and biochemical methods for species identification. J Clin Microbiol 2002;40(7):2483-2489.##Ahmad S, Khan Z. Invasive candidiasis: a review of nonculture-based laboratory diagnostic methods. Indian J Med Microbiol 2012;30(3):264-269. ##Trovato L, Betta P, Romeo MG, Oliveri S. Detection of fungal DNA in lysis–centrifugation blood culture for the diagnosis of invasive candidiasis in neonatal patients. Clin Microbiol Infect 2012;18(3):E63-E5.##Morris AJ, Byrne TC, Madden JF, Reller LB. Duration of incubation of fungal cultures. J Clin Microbiol 1996;34(6):1583-1585.##</REF>
        </REFRENCE>
    </REFRENCES>
</ARTICLE>

    </ARTICLES>
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