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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" article-type="letter" xml:lang="en">
	<front>
		<journal-meta>
			<journal-id journal-id-type="publisher-id">AJMB</journal-id>
			<journal-title>Avicenna Journal of Medical Biotechnology</journal-title>
			<issn pub-type="ppub">2008-2835</issn>
			<issn pub-type="epub">2008-4625</issn>
			<publisher>
				<publisher-name>Avicenna Research Institute</publisher-name>
			</publisher>
		</journal-meta>
		<article-meta>
			<article-id pub-id-type="publisher-id">AJMB-4-210</article-id>
			<article-categories>
				<subj-group subj-group-type="heading">
					<subject>Letter to the Editor</subject>
				</subj-group>
			</article-categories>
			<title-group>
				<article-title>Host-Microbiota Interaction is MyD88-Independent in the Intestinal Tract under Physiologic Condition</article-title>
			</title-group>
			<contrib-group>
				<contrib contrib-type="author">
					<name>
						<surname>Moossavi</surname>
						<given-names>Shirin</given-names>
					</name>
					<xref ref-type="aff" rid="AF0001">1</xref>
				</contrib>
				<contrib contrib-type="author" corresp="yes">
					<name>
						<surname>Rezaei</surname>
						<given-names>Nima</given-names>
					</name>
					<xref ref-type="aff" rid="AF0002">2</xref>
					<xref ref-type="aff" rid="AF0003">3</xref>
					<xref ref-type="aff" rid="AF0004">4</xref>
					<xref ref-type="corresp" rid="cor1">&#x002A;</xref>
				</contrib>
			</contrib-group>
			<aff id="AF0001">
				<label>1</label>Digestive Disease Research Center, Tehran University of Medical Sciences, Tehran, Iran</aff>
			<aff id="AF0002">
				<label>2</label>Research Center for Immunodeficiencies, Pediatrics Center of Excellence, Children&#x0027;s Medical Center, Tehran University of Medical Sciences, Tehran, Iran</aff>
			<aff id="AF0003">
				<label>3</label>Molecular Immunology Research Center, Department of Immunology, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran</aff>
			<aff id="AF0004">
				<label>4</label>Department of Infection and Immunity, School of Medicine and Biomedical Sciences, University of Sheffield, Sheffield, UK</aff>
			<author-notes>
				<corresp id="cor1"><label>&#x002A;</label>
					<bold>Corresponding author:</bold> Nima Rezaei, M.D., Ph.D., Children&#x0027;s Medical Centre Hospital, Tehran 14194, Iran. <bold>Tel:</bold> +98 21 66929234 <bold>Fax:</bold> +98 21 66929235. <bold>E-mails:</bold> <email xlink:href="rezaei_nima@tums.ac.ir">rezaei_nima@tums.ac.ir</email>; <email xlink:href="shirin.moossavi@gmail.com">shirin.moossavi@gmail.com</email>
				</corresp>
			</author-notes>
			<pub-date pub-type="ppub">
				<season>October-December</season>
				<year>2012</year>
			</pub-date>
			<volume>4</volume>
			<issue>4</issue>
			<fpage>210</fpage>
			<lpage>211</lpage>
			<history>
				<date date-type="received">
					<day>05</day>
					<month>08</month>
					<year>2012</year>
				</date>
				<date date-type="accepted">
					<day>30</day>
					<month>08</month>
					<year>2012</year>
				</date>
			</history>
			<permissions>
				<copyright-statement>Copyright &#x00A9; 2012 Avicenna Research Institute</copyright-statement>
				<copyright-year>2012</copyright-year>
				<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">
					<p>This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly.</p>
				</license>
			</permissions>
			<abstract>
				<p>The role of microbiota in health and disease is the subject of rigorous investigation. Several studies have demonstrated that microbiota and the pattern-recognition receptors contribute to intestinal tumourigenesis; the exact mechanism of which is still obscure. MyD88 is the downstream effector of all Toll-like receptors (TLRs) except TLR3. However, the alternative MyD88-independent pathway is functional downstream of not only TLR3, but also TLR1/2, 2/6, 4, and 5. TLR4 stimulation with intraperitoneal lipopolysaccharide exerts distinct functional effect on the intestinal motility via MyD88-dependent and-independent pathways.</p>
				</abstract>
			<kwd-group>
				<kwd>Host-microbiota interaction</kwd>
				<kwd>Intestinal tract</kwd>
				<kwd>Toll-like receptors</kwd>
			</kwd-group>
		</article-meta>
	</front>
	<body>
		<sec>
			<title/>
			<p>We read with interest the paper entitled &#x201C;Analysis of gut microbial regulation of host gene expression along the length of the gut and regulation of gut microbial ecology through MyD88&#x201D; by Larsson <italic>et al</italic> 
 (<xref ref-type="bibr" rid="CIT0001">1</xref>). The role of microbiota in health and disease is the subject of rigorous investigation. Several studies have demonstrated that microbiota and the Pattern-Recognition Receptors (PRRs) contribute to intestinal tumourigenesis; the exact mechanism of which is still obscure. Larsson <italic>et al</italic> have studied the effect of microbiota on the intestinal epithelial cell gene expression through a systematically microarray experiment in germfree <italic>vs</italic>. colonised mice. They have discovered that microbiota <italic>per se</italic> alters the intestinal gene expression in colonised mice in comparison to germfree counterparts.</p>
			<p>Toll-Like Receptors (TLRs) are a group of PRRs which detect a wide range of stimuli. All TLRs except TLR3 function via MyD88. To address the question on the mechanism of transcriptional effect of microbiota on the intestinal cells, Larsson <italic>et al</italic> conducted the microarray experiment in MyD88<sup>-/-</sup> mice. If the microbiota effect was largely mediated by TLR signalling, it was expected to discover similar expression patterns in germfree and MyD88<sup>-/-</sup> mice. However, interestingly germ-free mice demonstrate a distinct gene expression pattern compared to MyD88<sup>-/-</sup> mice. This finding is suggestive of a MyD88-indepen-dent mechanism of host-microbiota interaction in the normal intestine. MyD88 is the downstream effector of all TLRs except TLR3. However, the alternative MyD88-independent pathway is functional downstream of not only TLR3, but also TLR1/2, 2/6, 4, and 5 (<xref ref-type="bibr" rid="CIT0002">2</xref>&#x2013;<xref ref-type="bibr" rid="CIT0004">4</xref>). It is noteworthy that a distinctive host response to microbiota is observed through activation of different downstream effectors in the TLR pathway; (<xref ref-type="bibr" rid="CIT0005">5</xref>, <xref ref-type="bibr" rid="CIT0006">6</xref>) the implication of which in the intestinal homeostasis and tumo-urigenesis is still unknown. In addition, other members of PRRs namely, NOD-like receptors and RIG-I-like receptors are potentially implicated in the physiologic host-microbiota interaction.</p>
			<p>TRIF is the main adaptor of the MyD88-independent TLR signalling. MyD88 <sup>-/-</sup> TRIF<sup>-/-</sup> mice are completely unresponsive to TLR stimulation (<xref ref-type="bibr" rid="CIT0007">7</xref>). In other words, MyD88 and TRIF exhibit non-redundant effects in TLR signalling. Larsson <italic>et al</italic> have demonstrated that under physiologic condition, the MyD88-independent pathway is an important mechanism of intestinal homeostasis maintenance (<xref ref-type="bibr" rid="CIT0001">1</xref>). In order to fully understand the role of TLR signalling in the normal intestinal homeostasis, it is essential to study the TRIF-dependent pathway in a similar experiment in TRIF<sup>-/-</sup>
				<italic>vs</italic>. TRIF<sup>+/ +</sup> mice. It is conceivable that the balance between MyD88-dependent <italic>vs</italic>.&#x2013;independent pathways can fine-tune the TLR signalling in response to normal and altered microbiota in health and disease.</p>
		</sec>
	</body>
	<back>
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